Inside the Genetics Lab: Experiential Learning on Cutting Edge Tech
Students sequence DNA from the source to the screen with Professor Erika Ebbs.
In the Genetics Lab taught by Erika Ebbs, Assistant Professor of Biology, students learn how genetic data has become essential for identifying and describing parasite species diversity.
In a nine-week authentic research experience, students begin by extracting the DNA of an “unknown” parasite species recovered from a waterfowl host (a duck) in New York state.
Students then perform genomic sequencing in the classroom using MinION nanopore sequencing—a portable, palm-sized device that can be used in the lab or field.
Next, they perform all the necessary bioinformatics and downstream analysis using the professional-grade software Geneious Prime, the same software Dr. Ebbs uses in her own research. Her students have free access to the full program.
Using their acquired genetic data, they identify the parasite species, elucidate its life cycle, and make conclusions about its transmission within New York state.
To top off the experience, students will present their work at the professional-style 44th Annual James Utter Natural and Social Sciences Symposium on campus on May 2.
Working alongside a professor conducting aligned research lies at the core of our science experience, unusual for undergraduates in the sciences. Since there’s no competition with graduate students, our undergrads have our professors’ full attention and mentorship.
Learn more about Ebbs’ work in a previous issue of the college magazine.